PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B01751.1.p
Common NameEUGRSUZ_B01751
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family FAR1
Protein Properties Length: 515aa    MW: 58600.6 Da    PI: 6.7105
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B01751.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.95.6e-074375690
              FAR1 56 aetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                      + tr  C+ak++ k e  gkw+++k++leH+H la
  Eucgr.B01751.1.p  4 QGTRKTCEAKIRCKVE-GGKWRISKVVLEHSHGLA 37
                      56899**********9.***************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-4436IPR004330FAR1 DNA binding domain
PfamPF105515.1E-16137228IPR018289MULE transposase domain
PROSITE profilePS509669.619393429IPR007527Zinc finger, SWIM-type
SMARTSM005750.0064404431IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MPTQGTRKTC EAKIRCKVEG GKWRISKVVL EHSHGLAGHF AGDQEAVEDS PAARAPSTGE  60
YEAEPTLISN VGCSGVSRGT GRNPSMAQDL IDSFKSMQTE DSHFFYTVQL EAAQGMANFF  120
WRDGQSMVDY EHFGDVLILD TRTTINIYNM ICAAFWGLNH HRQRIIFGYA FLVDQGVDSF  180
KWLLQSFLGA MRGKKPETII TEVSEEIAEA LKVVLPGTFH RLPYWSILNS DRTDVNDLLS  240
ECIFNWNALL ARCNPHEKKQ FTSLYEMRKK WSLPFTKIVF SAGLLSIQNN EDSCPVFENL  300
SWETSLPQIA HRCKMVAKHL RSREFEEDEF CETTAAVDLE SRSPMEKQAK CLYTRPIFEM  360
FQKELINSLS LAIRVSNDRE TFELTEQDSK KIATVKVNRT DLTLACSCGK FKSVGILCFH  420
VLKVYNYFNI FEIPSCYLSK RWMKSAKDRL PIDTPSANTV QDSGASSRRE YMREALHVSH  480
GHGFKKRERI PLRAWRMEET EGHSEGIDDD AVEP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B01751.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041909.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 3-like
RefseqXP_010041915.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 3-like
TrEMBLA0A059D4320.0A0A059D432_EUCGR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM11826253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27110.21e-66FAR1-related sequence 3